Apoptosis and cell death

Apolist: monthly literature updates for researchers

Archive for March, 2010

Apolist – february 10

Posted by cris on March 3, 2010

BH3


Suppression of B-cell lymphomagenesis by the BH3-only proteins Bmf and Bad
Anna Frenzel, Verena Labi, Waldemar Chmelewskij, Christian Ploner,
Stephan Geley, Heidelinde Fiegl, Alexandar Tzankov, and Andreas
Villunger
http://bloodjournal.hematologylibrary.org/cgi/content/abstract/115/5/995

Active Fragments from Pro- and Antiapoptotic BCL-2 Proteins Have
Distinct Membrane Behavior Reflecting Their Functional Divergence
Yannis Guillemin, Jonathan Lopez, Diana Gimenez, Gustavo Fuertes, Juan
Garcia Valero, Loïc Blum, Philippe Gonzalo, Jesùs Salgado, Agnès
Girard-Egrot, Abdel Aouacheria
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009066

Aspirin induces apoptosis in human leukemia cells independently of
NF-?B and MAPKs through alteration of the Mcl-1/Noxa balance
Daniel Iglesias-Serret, Maria Piqué, Montserrat Barragán, Ana M.
Cosialls, Antonio F. Santidrián, Diana M. González-Gironès, Llorenç
Coll-Mulet, Mercè de Frias, Gabriel Pons & Joan Gil
http://www.springerlink.com/content/g317j1163012356w/

Noxa is necessary for hydrogen peroxide-induced caspase-dependent cell death
Pages 681-688
Tomonori Aikawa, Koei Shinzawa, Nobuyuki Tanaka, Yoshihide Tsujimoto
http://dx.doi.org/10.1016/j.febslet.2010.01.026

Extracellular BCL2 Proteins Are Danger-Associated Molecular Patterns
That Reduce Tissue Damage in Murine Models of Ischemia-Reperfusion
Injury
Akiko Iwata, Vicki Morgan-Stevenson, Barbara Schwartz, Li Liu, Joan
Tupper, Xiaodong Zhu, John Harlan, Robert Winn
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009103

FKBP38 protects Bcl-2 from caspase-dependent degradation
Bo-Hwa Choi, Lin Feng, and Ho Sup Yoon
J. Biol. Chem. published 5 February 2010, 10.1074/jbc.M109.032466
http://www.jbc.org/cgi/content/abstract/M109.032466v1

Coordinated regulation of p53 apoptotic targets BAX and PUMA by SMAR1
through an identical MAR element
Surajit Sinha, Sunil Kumar Malonia, Smriti P K Mittal, Kamini Singh,
Sreenath Kadreppa, Rohan Kamat, Robin Mukhopadhyaya, Jayanta K Pal and
Samit Chattopadhyay
http://www.nature.com/emboj/journal/v29/n4/abs/emboj2009395a.html

Evaluating bistability of Bax activation switch
Tingzhe Sun, Xuzhu Lin, Yinna Wei, Yichen Xu, Pingping Shen
http://dx.doi.org/10.1016/j.febslet.2010.01.034

Mechanistic Issues of the Interaction of the Hairpin-Forming Domain of
tBid with Mitochondrial Cardiolipin
François Gonzalvez, Fabrizio Pariselli, Olivier Jalmar, Pauline
Dupaigne, Franck Sureau, Marc Dellinger, Eric A. Hendrickson, Sophie
Bernard, Patrice X. Petit
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009342
The BCL-2 protein BAK is required for long-chain ceramide generation
during apoptosis
Leah J. Siskind, Thomas D. Mullen, Kimberly Romero Rosales,
Christopher J. Clarke, Maria José Hernandez-Corbacho, Aimee L.
Edinger, and Lina M. Obeid
http://www.jbc.org/cgi/content/abstract/M109.078121v1


death receptors

Receptor-interacting Protein Shuttles between Cell Death and Survival
Signaling Pathways
Pachiyappan Kamarajan, Julius Bunek, Yong Lin, Gabriel Nunez, and
Yvonne L. Kapila
RIP shuttles between CD95/Fas death and FAK survival signaling to
mediate anoikis.
http://www.molbiolcell.org/cgi/content/abstract/21/3/481?etoc

Fas/CD95 Deficiency in ApcMin/+ Mice Increases Intestinal Tumor Burden
Hector Guillen-Ahlers, Mark A. Suckow, Francis J. Castellino, Victoria
A. Ploplis
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009070


SHIP-1
inhibits CD95/APO-1/Fas-induced apoptosis in primary T
lymphocytes and T leukemic cells by promoting CD95 glycosylation
independently of its phosphatase activity.
Charlier E, Condé C, Zhang J, Deneubourg L, Di Valentin E, Rahmouni S,
Chariot A, Agostinis P, Pang PC, Haslam SM, Dell A, Penninger J,
Erneux C, Piette J, Gloire G.
http://www.nature.com/leu/journal/vaop/ncurrent/abs/leu20109a.html

A novel role of microtubular cytoskeleton in the dynamics of
caspase-dependent Fas/CD95 death receptor complexes during apoptosis
Eszter Doma, Krittalak Chakrabandhu, Anne-Odile Hueber
http://dx.doi.org/10.1016/j.febslet.2010.01.059

CD95-Ligand on Peripheral Myeloid Cells Activates Syk Kinase to
Trigger Their Recruitment to the Inflammatory Site
E. Letellier, S. Kumar, I. Sancho-Martinez, S. Krauth, A.
Funke-Kaiser, S. Laudenklos, K. Konecki, S. Klussmann, N.S. Corsini,
S. Kleber, N. Drost, A. Neumann, M. Lévi-Strauss, B. Brors, N. Gretz,
L. Edler, C. Fischer, O. Hill, M. Thiemann, B. Biglari, S. Karray, and
A. Martin-Villalba
http://dx.doi.org/10.1016/j.immuni.2010.01.011


Caspases / downstream / miscellaneous


Diffusion is capable of translating anisotropic apoptosis initiation
into a homogeneous execution of cell death.
Huber HJ, Laussmann MA, Prehn JH, Rehm M.
http://www.biomedcentral.com/1752-0509/4/9

Tudor staphylococcal nuclease is an evolutionarily conserved component
of the programmed cell death degradome.
Sundström JF, Vaculova A, Smertenko AP, Savenkov EI, Golovko A, Minina
E, Tiwari BS, Rodriguez-Nieto S, Zamyatnin AA Jr, Välineva T,
Saarikettu J, Frilander MJ, Suarez MF, Zavialov A, Ståhl U, Hussey PJ,
Silvennoinen O, Sundberg E, Zhivotovsky B, Bozhkov PV.
http://www.nature.com/ncb/journal/v11/n11/abs/ncb1979.html

Caspase-7 cleavage of Kaposi sarcoma-associated herpesvirus ORF57
confers a cellular function against viral lytic gene expression
Vladimir Majerciak, Michael Kruhlak, Pradeep K. Dagur, J. Philip
McCoy, Jr., and Zhi-Ming Zheng
J. Biol. Chem. published 16 February 2010, 10.1074/jbc.M109.068221
http://www.jbc.org/cgi/content/abstract/M109.068221v1

The cleaved-Caspase-3 antibody is a marker of Caspase-9-like DRONC
activity in Drosophila
Y Fan and A Bergmann
http://www.nature.com/cdd/journal/v17/n3/full/cdd2009185a.html

Differential release of chromatin-bound IL-1 discriminates between
necrotic and apoptotic cell death by the ability to induce sterile
inflammation
Idan Cohen, Peleg Rider, Yaron Carmi, Alex Braiman, Shahar Dotan,
Malka R. White, Elena Voronov, Michael U. Martin, Charles A.
Dinarello, and Ron N. Apte
http://www.pnas.org/content/107/6/2574.abstract?etoc

Live-Cell Imaging in Caenorhabditis elegans Reveals the Distinct Roles
of Dynamin Self-Assembly and Guanosine Triphosphate Hydrolysis in the
Removal of Apoptotic Cells
Bin He, Xiaomeng Yu, Moran Margolis, Xianghua Liu, Xiaohong Leng, Yael
Etzion, Fei Zheng, Nan Lu, Florante A. Quiocho, Dganit Danino, and
Zheng Zhou
http://www.molbiolcell.org/cgi/content/abstract/21/4/610?etoc

Apoptotic Cells Activate the “Phoenix Rising” Pathway to Promote Wound
Healing and Tissue Regeneration
Fang Li, Qian Huang, Jiang Chen, Yuanlin Peng, Dennis R. Roop, Joel S.
Bedford, and Chuan-Yuan Li
http://stke.sciencemag.org/cgi/content/abstract/sigtrans;3/110/ra13?etoc

Perforin activates clathrin- and dynamin-dependent endocytosis, which
is required for plasma membrane repair and delivery of granzyme B for
granzyme-mediated apoptosis
Jerome Thiery, Dennis Keefe, Saviz Saffarian, Denis Martinvalet,
Michael Walch, Emmanuel Boucrot, Tomas Kirchhausen, and Judy Lieberman
http://bloodjournal.hematologylibrary.org/cgi/content/abstract/115/8/1582

Cell-Nonautonomous Regulation of C. elegans Germ Cell Death by kri-1
S. Ito, S. Greiss, A. Gartner, and W.B. Derry
http://www.cell.com/current-biology/abstract/S0960-9822%2809%2902156-3

REVIEWS / COMMENTS

The BCL-2 Family Reunion
J.E. Chipuk, T. Moldoveanu, F. Llambi, M.J. Parsons, and D.R. Green

http://www.cell.com/molecular-cell/fulltext/S1097-2765(10)00079-1?large_figure=true
Crosstalk between apoptosis and autophagy within the Beclin 1 interactome
Maria Chiara Maiuri, Alfredo Criollo and Guido Kroemer
http://www.nature.com/emboj/journal/v29/n3/full/emboj2009377a.html

Larval midgut destruction in Drosophila: Not dependent on caspases but
suppressed by the loss of autophagy
Donna Denton, Bhupendra Shravage, Rachel Simin, Eric H. Baehrecke and
Sharad Kumar
http://www.landesbioscience.com/journals/autophagy/article/10601

DUB-le Trouble for Cell Survival
J.T. Opferman and D.R. Green
http://dx.doi.org/10.1016/j.ccr.2010.01.011

Beclin 1 modulates the anti-apoptotic activity of Bcl-2: Insights from a
pathogen infection system
Cristina Lourdes Vázquez and María Isabel Colombo
http://www.landesbioscience.com/journals/autophagy/article/10743
Molecular mechanisms of late apoptotic/necrotic cell clearance
I K H Poon, M D Hulett and C R Parish
http://www.nature.com/cdd/journal/v17/n3/full/cdd2009195a.html

BH3

Suppression of B-cell lymphomagenesis by the BH3-only proteins Bmf and Bad
Anna Frenzel, Verena Labi, Waldemar Chmelewskij, Christian Ploner, Stephan Geley, Heidelinde Fiegl, Alexandar Tzankov, and Andreas Villunger
http://bloodjournal.hematologylibrary.org/cgi/content/abstract/115/5/995

Active Fragments from Pro- and Antiapoptotic BCL-2 Proteins Have Distinct Membrane Behavior Reflecting Their Functional Divergence
Yannis Guillemin, Jonathan Lopez, Diana Gimenez, Gustavo Fuertes, Juan Garcia Valero, Loïc Blum, Philippe Gonzalo, Jesùs Salgado, Agnès Girard-Egrot, Abdel Aouacheria
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009066

Aspirin induces apoptosis in human leukemia cells independently of NF-?B and MAPKs through alteration of the Mcl-1/Noxa balance
Daniel Iglesias-Serret, Maria Piqué, Montserrat Barragán, Ana M. Cosialls, Antonio F. Santidrián, Diana M. González-Gironès, Llorenç Coll-Mulet, Mercè de Frias, Gabriel Pons & Joan Gil
http://www.springerlink.com/content/g317j1163012356w/

Noxa is necessary for hydrogen peroxide-induced caspase-dependent cell death
Pages 681-688
Tomonori Aikawa, Koei Shinzawa, Nobuyuki Tanaka, Yoshihide Tsujimoto
http://dx.doi.org/10.1016/j.febslet.2010.01.026

Extracellular BCL2 Proteins Are Danger-Associated Molecular Patterns That Reduce Tissue Damage in Murine Models of Ischemia-Reperfusion Injury
Akiko Iwata, Vicki Morgan-Stevenson, Barbara Schwartz, Li Liu, Joan Tupper, Xiaodong Zhu, John Harlan, Robert Winn
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009103

FKBP38 protects Bcl-2 from caspase-dependent degradation
Bo-Hwa Choi, Lin Feng, and Ho Sup Yoon
J. Biol. Chem. published 5 February 2010, 10.1074/jbc.M109.032466
http://www.jbc.org/cgi/content/abstract/M109.032466v1

Coordinated regulation of p53 apoptotic targets BAX and PUMA by SMAR1 through an identical MAR element
Surajit Sinha, Sunil Kumar Malonia, Smriti P K Mittal, Kamini Singh, Sreenath Kadreppa, Rohan Kamat, Robin Mukhopadhyaya, Jayanta K Pal and Samit Chattopadhyay
http://www.nature.com/emboj/journal/v29/n4/abs/emboj2009395a.html

Evaluating bistability of Bax activation switch
Tingzhe Sun, Xuzhu Lin, Yinna Wei, Yichen Xu, Pingping Shen
http://dx.doi.org/10.1016/j.febslet.2010.01.034

Mechanistic Issues of the Interaction of the Hairpin-Forming Domain of tBid with Mitochondrial Cardiolipin
François Gonzalvez, Fabrizio Pariselli, Olivier Jalmar, Pauline Dupaigne, Franck Sureau, Marc Dellinger, Eric A. Hendrickson, Sophie Bernard, Patrice X. Petit
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009342

The BCL-2 protein BAK is required for long-chain ceramide generation during apoptosis
Leah J. Siskind, Thomas D. Mullen, Kimberly Romero Rosales, Christopher J. Clarke, Maria José Hernandez-Corbacho, Aimee L. Edinger, and Lina M. Obeid
http://www.jbc.org/cgi/content/abstract/M109.078121v1

death receptors

Receptor-interacting Protein Shuttles between Cell Death and Survival Signaling Pathways
Pachiyappan Kamarajan, Julius Bunek, Yong Lin, Gabriel Nunez, and Yvonne L. Kapila
RIP shuttles between CD95/Fas death and FAK survival signaling to mediate anoikis.
http://www.molbiolcell.org/cgi/content/abstract/21/3/481?etoc

Fas/CD95 Deficiency in ApcMin/+ Mice Increases Intestinal Tumor Burden
Hector Guillen-Ahlers, Mark A. Suckow, Francis J. Castellino, Victoria A. Ploplis
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0009070

SHIP-1 inhibits CD95/APO-1/Fas-induced apoptosis in primary T lymphocytes and T leukemic cells by promoting CD95 glycosylation independently of its phosphatase activity.
Charlier E, Condé C, Zhang J, Deneubourg L, Di Valentin E, Rahmouni S, Chariot A, Agostinis P, Pang PC, Haslam SM, Dell A, Penninger J, Erneux C, Piette J, Gloire G.
http://www.nature.com/leu/journal/vaop/ncurrent/abs/leu20109a.html

A novel role of microtubular cytoskeleton in the dynamics of caspase-dependent Fas/CD95 death receptor complexes during apoptosis
Eszter Doma, Krittalak Chakrabandhu, Anne-Odile Hueber
http://dx.doi.org/10.1016/j.febslet.2010.01.059

CD95-Ligand on Peripheral Myeloid Cells Activates Syk Kinase to Trigger Their Recruitment to the Inflammatory Site
E. Letellier, S. Kumar, I. Sancho-Martinez, S. Krauth, A. Funke-Kaiser, S. Laudenklos, K. Konecki, S. Klussmann, N.S. Corsini, S. Kleber, N. Drost, A. Neumann, M. Lévi-Strauss, B. Brors, N. Gretz, L. Edler, C. Fischer, O. Hill, M. Thiemann, B. Biglari, S. Karray, and A. Martin-Villalba
http://dx.doi.org/10.1016/j.immuni.2010.01.011

Caspases

Diffusion is capable of translating anisotropic apoptosis initiation into a homogeneous execution of cell death.
Huber HJ, Laussmann MA, Prehn JH, Rehm M.
http://www.biomedcentral.com/1752-0509/4/9

Tudor staphylococcal nuclease is an evolutionarily conserved component of the programmed cell death degradome.
Sundström JF, Vaculova A, Smertenko AP, Savenkov EI, Golovko A, Minina E, Tiwari BS, Rodriguez-Nieto S, Zamyatnin AA Jr, Välineva T, Saarikettu J, Frilander MJ, Suarez MF, Zavialov A, Ståhl U, Hussey PJ, Silvennoinen O, Sundberg E, Zhivotovsky B, Bozhkov PV.
http://www.nature.com/ncb/journal/v11/n11/abs/ncb1979.html

Caspase-7 cleavage of Kaposi sarcoma-associated herpesvirus ORF57 confers a cellular function against viral lytic gene expression
Vladimir Majerciak, Michael Kruhlak, Pradeep K. Dagur, J. Philip McCoy, Jr., and Zhi-Ming Zheng
J. Biol. Chem. published 16 February 2010, 10.1074/jbc.M109.068221
http://www.jbc.org/cgi/content/abstract/M109.068221v1

The cleaved-Caspase-3 antibody is a marker of Caspase-9-like DRONC activity in Drosophila
Y Fan and A Bergmann
http://www.nature.com/cdd/journal/v17/n3/full/cdd2009185a.html

Differential release of chromatin-bound IL-1 discriminates between necrotic and apoptotic cell death by the ability to induce sterile inflammation
Idan Cohen, Peleg Rider, Yaron Carmi, Alex Braiman, Shahar Dotan, Malka R. White, Elena Voronov, Michael U. Martin, Charles A. Dinarello, and Ron N. Apte
http://www.pnas.org/content/107/6/2574.abstract?etoc

Live-Cell Imaging in Caenorhabditis elegans Reveals the Distinct Roles of Dynamin Self-Assembly and Guanosine Triphosphate Hydrolysis in the Removal of Apoptotic Cells
Bin He, Xiaomeng Yu, Moran Margolis, Xianghua Liu, Xiaohong Leng, Yael Etzion, Fei Zheng, Nan Lu, Florante A. Quiocho, Dganit Danino, and Zheng Zhou
http://www.molbiolcell.org/cgi/content/abstract/21/4/610?etoc

Apoptotic Cells Activate the “Phoenix Rising” Pathway to Promote Wound Healing and Tissue Regeneration
Fang Li, Qian Huang, Jiang Chen, Yuanlin Peng, Dennis R. Roop, Joel S. Bedford, and Chuan-Yuan Li
http://stke.sciencemag.org/cgi/content/abstract/sigtrans;3/110/ra13?etoc

Perforin activates clathrin- and dynamin-dependent endocytosis, which is required for plasma membrane repair and delivery of granzyme B for granzyme-mediated apoptosis
Jerome Thiery, Dennis Keefe, Saviz Saffarian, Denis Martinvalet, Michael Walch, Emmanuel Boucrot, Tomas Kirchhausen, and Judy Lieberman
Blood 2010;115 1582-1593
http://bloodjournal.hematologylibrary.org/cgi/content/abstract/115/8/1582

Cell-Nonautonomous Regulation of C. elegans Germ Cell Death by kri-1
S. Ito, S. Greiss, A. Gartner, and W.B. Derry
http://www.cell.com/current-biology/abstract/S0960-9822%2809%2902156-3

REVIEWS / COMMENTS

The BCL-2 Family Reunion
J.E. Chipuk, T. Moldoveanu, F. Llambi, M.J. Parsons, and D.R. Green
http://www.cell.com/molecular-cell/fulltext/S1097-2765(10)00079-1?large_figure=true

Crosstalk between apoptosis and autophagy within the Beclin 1 interactome
Maria Chiara Maiuri, Alfredo Criollo and Guido Kroemer
http://www.nature.com/emboj/journal/v29/n3/full/emboj2009377a.html

Larval midgut destruction in Drosophila: Not dependent on caspases but
suppressed by the loss of autophagy
Donna Denton, Bhupendra Shravage, Rachel Simin, Eric H. Baehrecke and
Sharad Kumar
http://www.landesbioscience.com/journals/autophagy/article/10601

DUB-le Trouble for Cell Survival
J.T. Opferman and D.R. Green
http://dx.doi.org/10.1016/j.ccr.2010.01.011

Beclin 1 modulates the anti-apoptotic activity of Bcl-2: Insights from a
pathogen infection system
Cristina Lourdes Vázquez and María Isabel Colombo
http://www.landesbioscience.com/journals/autophagy/article/10743

Molecular mechanisms of late apoptotic/necrotic cell clearance
I K H Poon, M D Hulett and C R Parish
http://www.nature.com/cdd/journal/v17/n3/full/cdd2009195a.html

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